{"id":327,"date":"2022-10-14T14:14:46","date_gmt":"2022-10-14T18:14:46","guid":{"rendered":"https:\/\/cecas.clemson.edu\/aidhy\/?page_id=327"},"modified":"2023-01-28T12:51:27","modified_gmt":"2023-01-28T17:51:27","slug":"ml-and-database","status":"publish","type":"page","link":"https:\/\/cecas.clemson.edu\/aidhy\/ml-and-database\/","title":{"rendered":"ML and Database"},"content":{"rendered":"\n<p class=\"has-text-align-center has-black-color has-white-background-color has-text-color has-background has-larger-font-size\" style=\"text-transform:uppercase\"><strong>Machine Learning Approaches<\/strong><\/p>\n\n\n\n<p class=\"has-text-color has-large-font-size\" style=\"color:#798691;letter-spacing:1px;text-transform:none\">We develop ML methods to overcome large phase-space challenge in chemically-complex materials.<\/p>\n\n\n\n<h2 class=\"has-text-color has-large-font-size wp-block-heading\" style=\"color:#5c6770\"><strong>The PREDICT Approach<\/strong><\/h2>\n\n\n\n<p class=\"has-medium-font-size\" style=\"font-style:normal;font-weight:400\"><span style=\"text-decoration: underline;\">PR<\/span>edict properties from <span style=\"text-decoration: underline;\">E<\/span>xisting <span style=\"text-decoration: underline;\">D<\/span>atabase in <span style=\"text-decoration: underline;\">C<\/span>omplex materials <span style=\"text-decoration: underline;\">T<\/span>erritory (PREDICT)<\/p>\n\n\n\n<div class=\"wp-block-group alignwide\"><div class=\"wp-block-group__inner-container is-layout-constrained wp-block-group-is-layout-constrained\">\n<div class=\"wp-block-columns alignwide are-vertically-aligned-center is-layout-flex wp-container-core-columns-is-layout-9d6595d7 wp-block-columns-is-layout-flex\">\n<div class=\"wp-block-column is-layout-flow wp-block-column-is-layout-flow\"><div class=\"wp-block-image\">\n<figure class=\"aligncenter size-large is-resized\"><a href=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/Chemical-complexity.png\"><img fetchpriority=\"high\" decoding=\"async\" src=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/Chemical-complexity-1024x392.png\" alt=\"\" class=\"wp-image-611\" width=\"454\" height=\"173\" srcset=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/Chemical-complexity-1024x392.png 1024w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/Chemical-complexity-300x115.png 300w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/Chemical-complexity-768x294.png 768w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/Chemical-complexity-1536x589.png 1536w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/Chemical-complexity-2048x785.png 2048w\" sizes=\"(max-width: 454px) 100vw, 454px\" \/><\/a><\/figure>\n<\/div><\/div>\n<\/div>\n<\/div><\/div>\n\n\n\n<p class=\"has-medium-font-size\" style=\"font-style:normal;font-weight:400\">In the realm of high entropy materials where  orders of magnitude compositions are possible, the conventional high-throughput DFT strategy for materials discovery fails miserably. <\/p>\n\n\n\n<figure class=\"wp-block-image size-large\"><a href=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/08\/Approach-2.png\"><img decoding=\"async\" width=\"1024\" height=\"265\" src=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/08\/Approach-2-1024x265.png\" alt=\"\" class=\"wp-image-226\" srcset=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/08\/Approach-2-1024x265.png 1024w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/08\/Approach-2-300x78.png 300w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/08\/Approach-2-768x198.png 768w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/08\/Approach-2-1536x397.png 1536w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/08\/Approach-2-2048x529.png 2048w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/08\/Approach-2-624x161.png 624w\" sizes=\"(max-width: 1024px) 100vw, 1024px\" \/><\/a><\/figure>\n\n\n\n<p class=\"has-medium-font-size\" style=\"font-style:normal;font-weight:400\">We have developed a new approach called <strong>PREDICT<\/strong> (PRedict properties from Existing Database in Complex materials Territory). A database of simpler\/binary materials is prepared once-and-for-all from DFT calculations. It is used to train ML model that can then predict properties in complex multi-elemental materials containing different elements. We have used this approach to successfully predict various properties including vacancy formation and migration energies,&nbsp;vibrational entropies,&nbsp;stacking fault energies&nbsp;and elastic constants in multi-elemental alloys.<\/p>\n\n\n\n<p class=\"has-medium-font-size\" style=\"font-style:normal;font-weight:400\">Figure shows a comparison of elastic constants between DFT vs ML in a 5-elemental alloy.<\/p>\n\n\n<div class=\"wp-block-image\">\n<figure class=\"aligncenter size-large is-resized\"><a href=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/Elastic-constant-ML.png\"><img decoding=\"async\" src=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/Elastic-constant-ML-910x1024.png\" alt=\"\" class=\"wp-image-614\" width=\"461\" height=\"519\" srcset=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/Elastic-constant-ML-910x1024.png 910w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/Elastic-constant-ML-267x300.png 267w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/Elastic-constant-ML-768x864.png 768w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/Elastic-constant-ML-1365x1536.png 1365w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/Elastic-constant-ML-1820x2048.png 1820w\" sizes=\"(max-width: 461px) 100vw, 461px\" \/><\/a><\/figure>\n<\/div>\n\n\n<h2 class=\"has-text-color wp-block-heading\" style=\"color:#5c6770\"><strong>Charge-Density Image Recognition Approach<\/strong><\/h2>\n\n\n\n<div class=\"wp-block-group is-vertical is-layout-flex wp-container-core-group-is-layout-8cf370e7 wp-block-group-is-layout-flex\">\n<p class=\"has-medium-font-size\" style=\"font-style:normal;font-weight:400\">Descriptors are a means to incorporate physics in ML models. Ascertaining correct descriptors has become a vexing issue. We propose that <strong>charge density<\/strong> is the fundamental descriptor which captures electronic and atomic descriptions.Various descriptors such as atomic radius, electronegativity, charge transfer, valence electrons, etc. are implicitly included in charge density. <\/p>\n\n\n\n<p class=\"has-medium-font-size\" style=\"font-style:normal;font-weight:400\">Hohenberg-Kohn theorem: Total energy of a many-body electron system is a functional of charge density.<\/p>\n\n\n\n<p><\/p>\n<\/div>\n\n\n<div class=\"wp-block-image\">\n<figure class=\"aligncenter size-full is-resized\"><a href=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/image-2.png\"><img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/image-2.png\" alt=\"\" class=\"wp-image-536\" width=\"123\" height=\"36\"\/><\/a><\/figure>\n<\/div>\n\n<div class=\"wp-block-image\">\n<figure class=\"aligncenter size-full is-resized\"><a href=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/image-1.png\"><img loading=\"lazy\" decoding=\"async\" src=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/image-1.png\" alt=\"\" class=\"wp-image-533\" width=\"547\" height=\"128\" srcset=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/image-1.png 573w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/image-1-300x70.png 300w\" sizes=\"(max-width: 547px) 100vw, 547px\" \/><\/a><\/figure>\n<\/div>\n\n\n<p class=\"has-medium-font-size\" style=\"font-style:normal;font-weight:400\">We have built a charge-density based convolutional neural network (CNN) model trained on charge density from DFT calculations. The model can predict stacking fault energies (SFE) in high entropy alloys (HEAs). A good comparison of DFT-calculated vs ML-predicted SFE is shown below.<\/p>\n\n\n\n<figure class=\"wp-block-image size-large\"><a href=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/CNN-3.png\"><img loading=\"lazy\" decoding=\"async\" width=\"1024\" height=\"427\" src=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/CNN-3-1024x427.png\" alt=\"\" class=\"wp-image-599\" srcset=\"https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/CNN-3-1024x427.png 1024w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/CNN-3-300x125.png 300w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/CNN-3-768x320.png 768w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/CNN-3-1536x640.png 1536w, https:\/\/cecas.clemson.edu\/aidhy\/wp-content\/uploads\/2022\/12\/CNN-3-2048x853.png 2048w\" sizes=\"(max-width: 1024px) 100vw, 1024px\" \/><\/a><\/figure>\n\n\n<p><\/p>\n\n\n<p><\/p>\n\n\n\n<p><\/p>\n\n\n\n<p><\/p>\n\n\n\n<p><\/p>\n\n\n\n<p><\/p>\n\n\n\n<p class=\"has-text-align-center has-black-color has-text-color has-larger-font-size\" style=\"text-transform:uppercase\"><strong>Database and Codes<\/strong><\/p>\n\n\n\n<p class=\"has-text-color has-large-font-size\" style=\"color:#798691\">All our data including ML codes in Jupyter notebook are shared on<strong> <a rel=\"noreferrer noopener\" href=\"https:\/\/github.com\/Materials-Computation-Data-Science-MCDC\" target=\"_blank\">Github<\/a>.<\/strong><\/p>\n\n\n\n<p><\/p>\n\n\n\n<p><\/p>\n\n\n\n<p><\/p>\n\n\n\n<p class=\"has-very-light-gray-to-cyan-bluish-gray-gradient-background has-text-color has-background has-large-font-size\" style=\"color:#5c6770;font-style:normal;font-weight:500\"><a href=\"https:\/\/github.com\/Materials-Computation-Data-Science-MCDC\/LAMMPS_Vac_Mig_Bar_Energies\">Point defect energetics <\/a><\/p>\n\n\n\n<p class=\"has-very-light-gray-to-cyan-bluish-gray-gradient-background has-text-color has-background has-large-font-size\" style=\"color:#5c6770;font-style:normal;font-weight:500\">Vibrational Entropy<\/p>\n\n\n\n<p class=\"has-very-light-gray-to-cyan-bluish-gray-gradient-background has-text-color has-background has-large-font-size\" style=\"color:#5c6770;font-style:normal;font-weight:500\"><a rel=\"noreferrer noopener\" href=\"https:\/\/github.com\/Materials-Computation-Data-Science-MCDC\/DFT_Elastic_Constants\" target=\"_blank\">Elastic Constants<\/a><\/p>\n\n\n\n<p class=\"has-very-light-gray-to-cyan-bluish-gray-gradient-background has-text-color has-background has-large-font-size\" style=\"color:#5c6770;font-style:normal;font-weight:500\"><a href=\"https:\/\/github.com\/Materials-Computation-Data-Science-MCDC\/DFT_Stacking_Fault_Energy\">Stacking Fault Energies <\/a><\/p>\n\n\n\n<p><\/p>\n","protected":false},"excerpt":{"rendered":"<p>Machine Learning Approaches We develop ML methods to overcome large phase-space challenge in chemically-complex materials. The PREDICT Approach PRedict properties from Existing Database in Complex<\/p>\n","protected":false},"author":5,"featured_media":0,"parent":0,"menu_order":1,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-327","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/cecas.clemson.edu\/aidhy\/wp-json\/wp\/v2\/pages\/327","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/cecas.clemson.edu\/aidhy\/wp-json\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/cecas.clemson.edu\/aidhy\/wp-json\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/cecas.clemson.edu\/aidhy\/wp-json\/wp\/v2\/users\/5"}],"replies":[{"embeddable":true,"href":"https:\/\/cecas.clemson.edu\/aidhy\/wp-json\/wp\/v2\/comments?post=327"}],"version-history":[{"count":79,"href":"https:\/\/cecas.clemson.edu\/aidhy\/wp-json\/wp\/v2\/pages\/327\/revisions"}],"predecessor-version":[{"id":920,"href":"https:\/\/cecas.clemson.edu\/aidhy\/wp-json\/wp\/v2\/pages\/327\/revisions\/920"}],"wp:attachment":[{"href":"https:\/\/cecas.clemson.edu\/aidhy\/wp-json\/wp\/v2\/media?parent=327"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}